publications (since 2016)
Phillips, M.A., Briar, R.K., Scaffo, M, Zhou, S, Burke, M.K. Strength of selection potentiates distinct adaptive responses in an evolution experiment with outcrossing yeast. biorXiv [PDF]
McHugh, K.M. & Burke, M.K. From microbes to mammals: the experimental evolution of aging and longevity across species. Evolution 76(4): 692-707 [PDF]
2022
Phillips, M.A., Kutch, I.C., McHugh, K.M., Taggard, S.K., Burke, M.K. Crossing design shapes patterns of genetic variation in synthetic populations of Saccharomyces cerevisiae. Scientific Reports 11(1):19551 [PDF]
Phillips, M.A. and Burke M.K. Can laboratory evolution experiments teach us about natural populations? Molecular Ecology 30(4):877-879 [PDF]
2021
Burke, M.K., McHugh, K.M., Kutch, I.C. Heat-shock improves random spore isolation in diverse strains of Saccharomyces cerevisiae. Frontiers in Genetics 11:1636 [PDF]
Phillips, M.A., Kutch, I.C., Long, A.D., Burke, M.K. Increased time-sampling in an evolve-and-resequence experiment with outcrossing Saccharomyces cerevisiae reveals multiple paths of adaptive change. Molecular Ecology 29(24): 4898-4912 [PDF]
Wing, K.M., Phillips, M.A., Baker, A.R., Burke, M.K. Consequences of cryopreservation in diverse natural isolates of Saccharomyces cerevisiae. Genome Biology and Evolution 12(8):1302-1312 [PDF]
2020
Hardy, C.M., Burke, M.K., Everett, L.J., Han, M.V., Lantz, K.M., Gibbs, A.G. Genome-wide analysis of starvation-selected Drosophila melanogaster – a genetic model of obesity. Molecular Biology and Evolution 30(1):50-65 [PDF]
2018
Shahrestani, P., Burke, M.K., Birse, R, Kezos, J.N., Ocorr, K., Mueller, L.D., Rose, M.R., Bodmer, R. 2017. Experimental evolution and heart function in Drosophila melanogaster. Physiological and Biochemical Zoology doi: 10.1086/689288 [PDF]
Graves, J.L, Hertweck, K.L., Phillips, M.A., Han, M.V., Cabral, L.G., Barter, T.T., Greer, L.F., Burke, M.K., Mueller, L.D., Rose, M.R. 2017. Genomics of parallel experimental evolution in Drosophila. Molecular Biology and Evolution 34(4): 831-842 [PDF]
2017
Phillips, M.A., Long, A.D., Greenspan, Z.S., Greer, L.F., Burke, M.K., Villeponteau, B., Matsagas, K.C., Rizza, C.L., Mueller, L.D., Rose, M.R. 2016. Genome-wide analysis of long-term evolutionary domestication in Drosophila melanogaster. Scientific Reports 6:39281 [PDF]
Burke, M.K., Barter, T.T., Cabral, L.G., Kezos, J.N., Phillips, M.A., Rutledge, G.A., Phung, K.H., Chen, R.H., Nguyen, H.D., Mueller, L.D., Rose, M.R. 2016. Rapid divergence and convergence of life-history in experimentally evolved Drosophila melanogaster. Evolution 70 (9): 2085-2098. [PDF]
2016