publications
McHugh, K.M. & Burke, M.K. From microbes to mammals: the experimental evolution of aging and longevity across species. Evolution (https://doi.org/10.1111/evo.14442)
2022
Phillips, M.A., Kutch, I.C., McHugh, K.M., Taggard, S.K., Burke, M.K. Crossing design shapes patterns of genetic variation in synthetic populations of Saccharomyces cerevisiae. Scientific Reports 11(1):19551
Phillips, M.A. and Burke M.K. Can laboratory evolution experiments teach us about natural populations? Molecular Ecology 30(4):877-879
2021
Burke, M.K., McHugh, K.M., Kutch, I.C. Heat-shock improves random spore isolation in diverse strains of Saccharomyces cerevisiae. Frontiers in Genetics 11:1636
Phillips, M.A., Kutch, I.C., Long, A.D., Burke, M.K. Increased time-sampling in an evolve-and-resequence experiment with outcrossing Saccharomyces cerevisiae reveals multiple paths of adaptive change. Molecular Ecology 29(24): 4898-4912
Wing, K.M., Phillips, M.A., Baker, A.R., Burke, M.K. Consequences of cryopreservation in diverse natural isolates of Saccharomyces cerevisiae. Genome Biology and Evolution 12(8):1302-1312
2020
Hardy, C.M., Burke, M.K., Everett, L.J., Han, M.V., Lantz, K.M., Gibbs, A.G. Genome-wide analysis of starvation-selected Drosophila melanogaster – a genetic model of obesity. Molecular Biology and Evolution 30(1):50-65
2018
Shahrestani, P., Burke, M.K., Birse, R, Kezos, J.N., Ocorr, K., Mueller, L.D., Rose, M.R., Bodmer, R. 2017. Experimental evolution and heart function in Drosophila melanogaster. Physiological and Biochemical Zoology doi: 10.1086/689288
Graves, J.L, Hertweck, K.L., Phillips, M.A., Han, M.V., Cabral, L.G., Barter, T.T., Greer, L.F., Burke, M.K., Mueller, L.D., Rose, M.R. 2017. Genomics of parallel experimental evolution in Drosophila. Molecular Biology and Evolution 34(4): 831-842
2017
Phillips, M.A., Long, A.D., Greenspan, Z.S., Greer, L.F., Burke, M.K., Villeponteau, B., Matsagas, K.C., Rizza, C.L., Mueller, L.D., Rose, M.R. 2016. Genome-wide analysis of long-term evolutionary domestication in Drosophila melanogaster. Scientific Reports 6:39281.
Burke, M.K., Barter, T.T., Cabral, L.G., Kezos, J.N., Phillips, M.A., Rutledge, G.A., Phung, K.H., Chen, R.H., Nguyen, H.D., Mueller, L.D., Rose, M.R. 2016. Rapid divergence and convergence of life-history in experimentally evolved Drosophila melanogaster. Evolution 70 (9): 2085-2098.
2016
Burke, M.K., Liti, G., Long, A.D. 2014. Experimental evolution is replicable at the molecular level in recombining outbred populations of Saccharomyces cerevisiae. Molecular Biology and Evolution 31(12):3228-3239.
Burke M.K., King, E.G., Shahrestani, P., Rose, M.R., Long, A.D. 2014. Genome-wide association study of extreme longevity in Drosophila melanogaster. Genome Biology and Evolution 6:1-11.
2014
Burke, M.K. and Long, A.D. 2012. What paths do advantageous alleles take during short-term evolutionary change? Molecular Ecology 21(20):4913-4916.
Burke, M.K. 2012. How does adaptation sweep through the genome? Insights from long-term selection experiments. Proceedings of the Royal Society B 279
2012
Rose, M.R., Mueller, L.D., Burke, M.K. 2011. New experiments for an undivided genetics. Genetics 188:1-10
Rose, M.R. and Burke, M.K. 2011. Genomic Croesus: Experimental evolutionary genetics of Drosophila aging. Experimental Gerontology 46(5):397-403
2011
Burke, M.K., Dunham, J.P., Shahrestani, P., Thornton, K.R., Rose, M.R., Long, A.D. 2010. Genome-wide analysis of a long-term evolution experiment with Drosophila. Nature 467: 587-590.
2010
Burke M.K. and Rose M.R. 2009. Experimental evolution with Drosophila. American Journal of Physiology: Integrative, Regulatory, and Comparative Physiology 296:1847-1854
2009
Rose M.R., Burke M.K., Shahrestani P., Mueller L.D. 2008. Evolution of ageing since Darwin. Journal of Genetics 87(4):363-371
2008
Chen B., Walser J.C., Rodgers T.H., Sobota R.S., Burke M.K., Rose M.R., Feder M.E. 2007. Abundant, Diverse, and Consequential P Elements Segregate in Promoters of Small Heat-Shock Genes in Drosophila Populations. Journal of Evolutionary Biology 20(5): 2056-206
2007